Plant GARDEN
How To ▶︎

JA

EN

TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

Search

By Species By Keywords Genes By Markers By Traits

Let’s Analyze!!

SNP Detection
(lang=JA only) Sequences Other Tools

Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015905725.1_cds_XP_016455977.1_49859
CDS Infomation

[gene=LOC107779987] [db_xref=GeneID:107779987] [protein=apolipoprotein A-I-like] [protein_id=XP_016455977.1] [location=complement(join(107104..107185,107311..107372,107507..107587,108464..108619,109152..109316,110408..110470,110567..110629,110704..110757,112267..112323,112397..112465,113484..113669,113787..113933))] [gbkey=CDS]
Sequence

ATGGGTTTTGTTTTTCAAGAATCAAACATTGAGGAGACTGTGCGAGCACTGAAAGGAAAG
GATGAGGTGATTGCTGACAAGGAGAAGACAATAAAAAAGAAGTCAGAGAGGGTTAAGTCA
TTGTCAACTGAGTTGGCTTCTCTACAGAAAAAGGGAACACTAGATGCCGAGGAGCAAGTT
GGAAAGGCTCGTGCACGAGCTGATCAGCTTGAAAAGCAAGTTGAGAGACTAACGGAGGAA
GTTGAATTGAAGAATAAGGAGAAAAAAGACTTCGAAGCACATAAAGGTGAAACTGAGAAG
AGAGTAACTGAGTTAAATTTGAAGGTTGACAAGCTCCAGAAGACCATTGATGAACAGAAG
GAGAAACTGCAAAAAACTGAACGAGCTCTTCAACTTGCTGAGGAGGAAATGATTAGAGCA
AGGTTTGAAGCCACATCGAAGATGAAGGAGCTCATGGAGGTGCATGGGGCATGGCTTCCA
CGTTGGCTGGCAGTTCATTGGACTCACTACCAGTCTCTCTTGGAGAAGCATTGGCAGGAG
CATGGAAAACCTGCCATGGACATAATGATACAGAAGGCAGTTGAGAAGAAGGCCCAAGCT
GAGGTATGGGCTGCGCCACATGTAGAAACAGTCAAAACAAAATGGATGCCAGCTGTGAAG
GAACAGTGGGTGGTAATCACCACTAACCTCAAGCCACATGCAGAATTGCTAAAGACCAAA
ACATTTGAGATTTATGAAACATCTAAAGGTGCCATAACTCCACATATCGTCAAAGTTCAG
GAACTAGCAGAACCCCACGTTCAGGAACTTAAAAAATTCAGCAAGCCATACATTGATCAG
GTTGCCACTGCTACAAGACCTCATGTTGAAAAAGTCCGTATTGCTGTAAAGCCATACACA
GATGTGGCAGTTCATCATTATGGGAAGTTCCTTGAATCTGCAACAGTATACCATCATCAG
CTGCAAGACACAGTCGATGAAACACTGAAGAAACATGAGCTTACAAGACCTCTTGCAACA
AAGGAGTTTGTCTGGTTTGCTGCCTCAGCGGTTTTGGCTCTGCCTGTTATGATACTGTTC
AAACTTTTGTCGGCCATTTTCTGCACAAAGGCAAAGAAACCCAGCCGAAATGGTCATTCA
CACCATTCACGTCGTAAGGCCAAGAGGGTACACGCAGACAAGTAG

Peptide Sequence

PEP ID

XP_016455977.1
PEP Infomation

PREDICTED: apolipoprotein A-I-like [Nicotiana tabacum]
Sequence

MGFVFQESNIEETVRALKGKDEVIADKEKTIKKKSERVKSLSTELASLQKKGTLDAEEQV
GKARARADQLEKQVERLTEEVELKNKEKKDFEAHKGETEKRVTELNLKVDKLQKTIDEQK
EKLQKTERALQLAEEEMIRARFEATSKMKELMEVHGAWLPRWLAVHWTHYQSLLEKHWQE
HGKPAMDIMIQKAVEKKAQAEVWAAPHVETVKTKWMPAVKEQWVVITTNLKPHAELLKTK
TFEIYETSKGAITPHIVKVQELAEPHVQELKKFSKPYIDQVATATRPHVEKVRIAVKPYT
DVAVHHYGKFLESATVYHHQLQDTVDETLKKHELTRPLATKEFVWFAASAVLALPVMILF
KLLSAIFCTKAKKPSRNGHSHHSRRKAKRVHADK

Transcript Sequence

Gene sequence data has not been registered.